mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jfgl_dqi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:47:01,336 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:47:02,123 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:47:02,291 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:47:03,181 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:47:03,333 - cnv_pipe.batch.run_model - INFO - Processing cluster 52 with 193 probes
2026-06-03 21:47:03,704 - cnv_pipe.batch.run_model.cluster52 - INFO - Child process started for cluster 52 with 193 probes
2026-06-03 21:47:58,208 - cnv_pipe.batch.run_model.cluster52 - INFO - Child process finished cluster 52. Wrote cluster_52_samples.csv and cluster_52_params.csv
2026-06-03 21:47:58,209 - cnv_pipe.batch.run_model - INFO - Cluster 52 finished in 54.88 seconds. Status: SUCCESS