mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xg1l2ljh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:47:53,313 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:47:54,118 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:47:54,298 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:47:55,264 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:47:55,459 - cnv_pipe.batch.run_model - INFO - Processing cluster 386 with 178 probes
2026-06-03 21:47:55,861 - cnv_pipe.batch.run_model.cluster386 - INFO - Child process started for cluster 386 with 178 probes
2026-06-03 21:48:50,058 - cnv_pipe.batch.run_model.cluster386 - INFO - Child process finished cluster 386. Wrote cluster_386_samples.csv and cluster_386_params.csv
2026-06-03 21:48:50,060 - cnv_pipe.batch.run_model - INFO - Cluster 386 finished in 54.60 seconds. Status: SUCCESS