[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXeshfb7/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXeshfb7/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXeshfb7/chr6_138229684-138229952.bed.gz.tbi
[2026-06-03T21:45:04.068198Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:45:04.068762Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:45:04.068775Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:45:04.068780Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:45:04.068784Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXeshfb7'
[2026-06-03T21:45:04.068788Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:45:04.068794Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:45:04.068797Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:45:04.068802Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T21:45:04.068806Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:45:04.068809Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:45:04.068813Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:45:04.068817Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:45:04.068820Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:45:04.069276Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:45:04.069391Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:45:04.075644Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:45:04.076425Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:45:04.076719Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:45:04.076980Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:45:04.077225Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.077781Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.077875Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.077948Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.078068Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.078136Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.078257Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.078414Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.078786Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.079058Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.079417Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.079910Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.082375Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.082936Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:45:04.083127Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.083377Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.083727Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.083804Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.083925Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.083992Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.084197Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.084266Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.084378Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.084446Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.084558Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.084620Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.085107Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.085384Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.085547Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.085624Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.085745Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.085817Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.085950Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.086014Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.086130Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.086195Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.086323Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.086512Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.086952Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087032Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087147Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087211Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087332Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087397Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087509Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087573Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087692Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087820Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.087961Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.088172Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.088625Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.088696Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.088802Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.088866Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.088992Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.089059Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.089174Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.089241Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.089349Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.089415Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.089531Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.089767Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090259Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090358Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090473Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090544Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090656Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090716Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090827Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.090920Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.091031Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.091098Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.091219Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.091309Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.093559Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094141Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094266Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094335Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094446Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094510Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094619Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094686Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094799Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094860Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.094970Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.095037Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.095169Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.095272Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.095664Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096245Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096367Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096432Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096539Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096638Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096766Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096833Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.096962Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.097057Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.097169Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.097238Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.097455Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.097570Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.097789Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.098579Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.098931Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.099723Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.100656Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.100735Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.100859Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.100941Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.103632Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.104371Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.104649Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.104725Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.114573Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.120093Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.121043Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.121263Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.121641Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.121887Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.122669Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.122978Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.123536Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.123863Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.124512Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.125210Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.125779Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.126184Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.127661Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.128280Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.129301Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:04.129627Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.130312Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:45:04.135769Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:04.136143Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T21:45:04.139800Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:04.144373Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T21:45:04.144944Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T21:45:04.149140Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:04.150362Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T21:45:04.151640Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T21:45:04.265463Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.265609Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.266981Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.267337Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.271875Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T21:45:04.273077Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T21:45:04.935120Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.937175Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.940961Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T21:45:05.352958Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.354468Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.358090Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T21:45:05.469572Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.470963Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.474219Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T21:45:05.487298Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.488687Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.492660Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T21:45:05.804565Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.806089Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.809628Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:05.921297Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.922674Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.926059Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T21:45:05.987418Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.988924Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.992430Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:06.054062Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.056046Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.060188Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T21:45:06.121211Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.122639Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.126246Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:06.187947Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.189491Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.193161Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T21:45:06.555370Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.555472Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.556762Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.557068Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.560740Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T21:45:06.562888Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T21:45:06.621881Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.623302Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.626666Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T21:45:06.627391Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.628400Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.631953Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T21:45:06.693301Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.694733Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.697810Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T21:45:06.759196Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.760597Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.764322Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:06.825297Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.825410Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.826822Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.827297Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.830928Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T21:45:06.832781Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:06.892725Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.894035Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.896147Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.897254Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T21:45:06.897732Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.900728Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:06.929886Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.931271Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.931700Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.935482Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.935886Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:06.938902Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T21:45:06.943712Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.944901Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.947696Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T21:45:07.009390Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.009473Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.010611Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.010881Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.014465Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:07.015548Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T21:45:07.075981Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.077384Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.081055Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:07.192434Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.192573Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.193806Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.194120Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.197502Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:07.198587Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T21:45:07.226631Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.227903Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.231544Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T21:45:07.244336Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.245585Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.248851Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T21:45:07.278093Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.279384Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.282233Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:07.393909Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.395156Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.399307Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T21:45:07.411566Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.412722Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.415745Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T21:45:07.477233Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.478412Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.481546Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T21:45:08.044557Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.045764Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.048748Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T21:45:08.110149Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.111356Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.114336Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T21:45:08.226019Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.227208Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.230218Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T21:45:08.291888Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.293122Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.296276Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T21:45:08.357566Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.358685Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.362518Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T21:45:08.423556Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.424618Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.427870Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T21:45:08.489126Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.489263Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.490307Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.490572Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.493589Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T21:45:08.494476Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:08.555101Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.555205Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.556098Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.556386Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.559568Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:08.560588Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T21:45:08.621247Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.622373Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.625121Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:08.654754Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.655854Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.658967Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T21:45:08.719992Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.720077Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.721095Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.721434Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.724541Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T21:45:08.725601Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T21:45:08.785896Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.787075Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.790866Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T21:45:08.852023Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.853097Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:08.856499Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T21:45:09.018182Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.019263Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.022591Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T21:45:09.083901Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.084848Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.088273Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T21:45:09.117522Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.118585Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.121988Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T21:45:09.233548Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.234552Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.237663Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T21:45:09.266985Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.267994Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.271062Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T21:45:09.332714Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.333679Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.336629Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:09.398059Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.399036Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.402126Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:09.415014Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.415896Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.419464Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:09.480385Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.480467Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.481335Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.481731Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.484984Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:09.485646Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T21:45:09.546151Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.546279Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.547269Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.547662Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.551711Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T21:45:09.812449Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.813334Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.816119Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:09.877808Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.878760Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.881823Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:09.943015Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.943875Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:09.947060Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:10.359151Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.360053Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.363463Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T21:45:10.392814Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.393739Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.397039Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T21:45:10.458293Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.459153Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.462104Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T21:45:10.523549Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.524358Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.527211Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T21:45:10.540382Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.541195Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.544271Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T21:45:10.557092Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.557886Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.560672Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T21:45:10.590296Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.591157Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.594252Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:10.655388Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.656255Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.659013Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:10.672185Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.673003Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.675794Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T21:45:10.688905Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.689724Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.692626Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T21:45:10.705526Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.706236Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.709052Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T21:45:10.820710Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.821466Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.823604Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T21:45:10.824508Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T21:45:10.825403Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.826108Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.829121Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T21:45:10.858095Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.858864Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.861632Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:10.874827Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.875562Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:10.878116Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T21:45:11.140155Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.140926Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.143793Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:11.173135Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.173895Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.176556Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:11.205940Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.206738Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.209465Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T21:45:11.239161Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.239861Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.242520Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:11.255627Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.256261Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.258893Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T21:45:11.320367Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.321085Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.323854Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:11.353281Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.353919Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.356655Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T21:45:11.361632Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.362225Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.364589Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T21:45:11.394127Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.394214Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.394764Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.395015Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.397447Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T21:45:11.398404Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T21:45:11.459154Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.459243Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.459794Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.460210Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.463058Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T21:45:11.463848Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:11.492414Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.493022Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.495453Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T21:45:11.557153Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.557778Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.560332Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:11.589840Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.590414Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.592906Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:11.622520Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.623103Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.625653Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T21:45:11.655143Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.655224Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.655747Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.658494Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T21:45:11.688015Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.752221Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.752769Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.755248Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T21:45:11.784774Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.899290Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.899838Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.902563Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T21:45:11.932183Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.196844Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.197346Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.199883Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T21:45:12.229496Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.261645Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.262099Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.264440Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T21:45:12.293982Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.508360Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.508846Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.511237Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:12.524655Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.525178Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.527380Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T21:45:12.540943Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.556758Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.557044Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.557182Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.557457Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.557638Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.561983Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:12.563279Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:12.563845Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:12.590033Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.590103Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.590124Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.590324Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.591585Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.592949Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:12.593921Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:12.623667Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.623735Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.623911Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:12.626076Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:12.655838Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:14.724705Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:22.957265Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:22.957265Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] 
[2026-06-03T21:45:22.957265Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T21:45:22.957354Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] 
[2026-06-03T21:45:22.957363Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:22.957370Z] [nf-c0c2de6b2a699d39e6edf0c0f4ab47e9-8e698-gtk6q] [562_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec