File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e8/48d9c77bff3d68094b7cbf8d881354/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bzjnknc8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:20,369 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:21,177 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:21,352 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:22,304 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:22,480 - cnv_pipe.batch.run_model - INFO - Processing cluster 1190 with 196 probes
2026-06-03 21:50:22,853 - cnv_pipe.batch.run_model.cluster1190 - INFO - Child process started for cluster 1190 with 196 probes
2026-06-03 21:51:19,986 - cnv_pipe.batch.run_model.cluster1190 - INFO - Child process finished cluster 1190. Wrote cluster_1190_samples.csv and cluster_1190_params.csv
2026-06-03 21:51:19,987 - cnv_pipe.batch.run_model - INFO - Cluster 1190 finished in 57.51 seconds. Status: SUCCESS