mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rmmj_ij1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:43,070 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:43,879 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:44,051 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:45,101 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:45,172 - cnv_pipe.batch.run_model - INFO - Processing cluster 672 with 195 probes
2026-06-03 21:48:45,546 - cnv_pipe.batch.run_model.cluster672 - INFO - Child process started for cluster 672 with 195 probes
2026-06-03 21:49:42,050 - cnv_pipe.batch.run_model.cluster672 - INFO - Child process finished cluster 672. Wrote cluster_672_samples.csv and cluster_672_params.csv
2026-06-03 21:49:42,051 - cnv_pipe.batch.run_model - INFO - Cluster 672 finished in 56.88 seconds. Status: SUCCESS