File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/7db69585609ae3ea9444c16b404f42/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2285qm_9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:54,262 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:55,054 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:55,227 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:56,172 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:56,253 - cnv_pipe.batch.run_model - INFO - Processing cluster 1359 with 167 probes
2026-06-03 21:50:56,702 - cnv_pipe.batch.run_model.cluster1359 - INFO - Child process started for cluster 1359 with 167 probes
2026-06-03 21:51:46,031 - cnv_pipe.batch.run_model.cluster1359 - INFO - Child process finished cluster 1359. Wrote cluster_1359_samples.csv and cluster_1359_params.csv
2026-06-03 21:51:46,032 - cnv_pipe.batch.run_model - INFO - Cluster 1359 finished in 49.78 seconds. Status: SUCCESS