Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/d72d95d354f9f8d177cde2789f1692/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/8ee7221cb00667c7914a883215e2de/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/8ee7221cb00667c7914a883215e2de/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/d72d95d354f9f8d177cde2789f1692/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX1MJdPl/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX1MJdPl/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX1MJdPl/chr6_138229684-138229952.bed.gz.tbi
[2026-06-03T21:45:00.766983Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T21:45:00.774292Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T21:45:00.774326Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T21:45:00.774333Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T21:45:00.774338Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX1MJdPl'
[2026-06-03T21:45:00.774344Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T21:45:00.774350Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T21:45:00.774354Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T21:45:00.774358Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T21:45:00.774363Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T21:45:00.774368Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T21:45:00.774372Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T21:45:00.774376Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T21:45:00.774381Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T21:45:00.775150Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T21:45:00.775261Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T21:45:00.781067Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T21:45:00.781863Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T21:45:00.782042Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T21:45:00.782189Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T21:45:00.782446Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.783089Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.783183Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.783254Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.783369Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.783433Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.783596Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.783855Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.784021Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.784187Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.784262Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.784691Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.785156Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.786914Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.787391Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.787492Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T21:45:00.787751Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.787824Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.787936Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.788004Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.788188Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.788257Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.788370Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.788597Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.788939Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789003Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789124Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789190Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789299Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789365Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789475Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789542Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789653Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789739Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789849Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.789931Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.790256Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.790542Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.790667Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.790727Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.790837Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.790898Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.791007Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.791074Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.791211Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.791273Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.791387Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.791450Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.791670Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792075Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792201Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792265Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792376Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792438Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792561Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792629Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792743Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792807Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792914Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.792981Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.793094Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.793212Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.793721Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.793786Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.793893Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.793965Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794074Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794134Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794267Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794332Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794440Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794504Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794609Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.794673Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.796029Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.796615Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.796752Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.796822Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.796934Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797000Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797107Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797167Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797278Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797337Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797450Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797533Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797655Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.797729Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.798077Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.798386Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799131Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799208Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799324Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799391Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799507Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799579Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799693Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799757Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799865Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.799932Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.800118Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.800313Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801098Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801175Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801284Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801352Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801460Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801522Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801629Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.801690Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.803829Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.804014Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.804944Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.805013Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.818263Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.819031Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.819185Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.819353Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.820343Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.820583Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.820787Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.821178Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.821502Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.821915Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.822112Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.822983Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.823335Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.824031Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T21:45:00.824386Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.824914Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T21:45:00.825745Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.826630Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.829473Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.829948Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:00.833298Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T21:45:00.836462Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T21:45:00.839386Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:00.842296Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T21:45:00.845359Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T21:45:00.846065Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T21:45:00.848869Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T21:45:00.911913Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.911985Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.912987Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.913581Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.917106Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T21:45:00.918143Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T21:45:00.978103Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.979233Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:00.982198Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T21:45:01.695936Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.696015Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.697108Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.697486Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.701276Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T21:45:01.702058Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T21:45:01.912243Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.913446Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.916509Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:01.977693Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.978878Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:01.981925Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T21:45:02.043245Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.043340Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.044426Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.044719Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.048299Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T21:45:02.048841Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T21:45:02.109273Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.110509Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.113622Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:02.142972Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.144093Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.147293Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:02.175967Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.177467Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.180637Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T21:45:02.209490Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.210662Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.213288Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T21:45:02.274838Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.276004Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.278715Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T21:45:02.340028Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.340123Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.341309Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.341630Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.344554Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T21:45:02.345933Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T21:45:02.374088Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.375171Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.377817Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T21:45:02.489438Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.489512Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.490576Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.491225Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.494155Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T21:45:02.523274Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T21:45:02.524105Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.524167Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.525157Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.525459Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.528475Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:02.529371Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T21:45:02.589741Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.589827Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.590902Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.591331Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.594722Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T21:45:02.595769Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:02.624881Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.625917Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.629030Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:02.658213Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.659208Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.662301Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:02.773450Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.774529Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.778142Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T21:45:02.889423Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.890549Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.893537Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T21:45:02.954698Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.955739Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.958871Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T21:45:02.987823Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.988847Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:02.992146Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T21:45:03.304037Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.304159Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.305174Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.305481Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.308659Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T21:45:03.309714Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T21:45:03.369919Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.371002Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.373814Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T21:45:03.403034Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.404029Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.406994Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T21:45:03.468227Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.469265Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.472392Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T21:45:03.501601Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.502634Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.505273Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T21:45:03.534578Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.535583Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.538532Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:03.649791Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.650808Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.653684Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T21:45:03.682714Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.683643Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.686524Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:03.747823Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.747902Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.748840Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.749176Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.752666Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:03.752913Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T21:45:03.781589Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.782530Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.785473Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:03.814578Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.814676Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.815553Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.815987Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.818980Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:03.819899Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T21:45:03.849700Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.849787Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.849827Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.850746Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.851169Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.852700Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.853591Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T21:45:03.855868Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T21:45:03.856778Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T21:45:03.917253Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.917328Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.918205Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.918708Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.921798Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T21:45:03.922955Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T21:45:03.983108Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.984016Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:03.987202Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T21:45:04.016047Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.016965Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.019637Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T21:45:04.081055Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.081979Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.084987Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T21:45:04.146314Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.147225Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.150171Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T21:45:04.361704Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.362636Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.365334Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T21:45:04.394708Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.395612Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.398204Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:04.403357Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.404109Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.407088Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T21:45:04.468271Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.468368Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.469234Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.469690Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.472629Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T21:45:04.473489Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T21:45:04.534662Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.534759Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.535596Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.535972Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.539624Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T21:45:04.541059Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T21:45:04.700824Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.701706Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.704913Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T21:45:04.766126Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.767054Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:04.770432Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T21:45:05.081838Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.081938Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.082687Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.083132Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.086042Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T21:45:05.087059Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T21:45:05.147621Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.148499Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.151267Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T21:45:05.262785Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.263651Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.266573Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T21:45:05.295878Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.296692Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.299314Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T21:45:05.328745Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.329591Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.332652Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:05.393854Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.394736Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.398032Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T21:45:05.509325Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.510211Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.513057Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T21:45:05.574551Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.575388Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.578245Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T21:45:05.607460Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.608266Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.611089Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T21:45:05.640300Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.641145Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.644160Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:05.705408Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.706217Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.710069Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T21:45:05.770434Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.773209Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.776174Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:05.777223Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.777890Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.780670Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T21:45:05.809780Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.810488Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.813510Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T21:45:05.842638Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.843392Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.846277Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T21:45:05.859513Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.860213Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.863345Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T21:45:05.876356Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.877031Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.880337Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T21:45:05.892899Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.893580Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.896221Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T21:45:05.926116Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.926201Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.926887Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.927317Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.930165Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T21:45:05.931322Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T21:45:05.960064Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.960837Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.963569Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T21:45:05.992895Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.993646Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:05.996824Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T21:45:06.058038Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.058773Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.062196Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T21:45:06.090884Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.091615Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.094692Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T21:45:06.123666Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.124358Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.127397Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T21:45:06.339111Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.339852Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.343026Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T21:45:06.372040Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.372750Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.375641Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T21:45:06.404841Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.405506Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.408543Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T21:45:06.437526Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.438194Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.441303Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T21:45:06.552542Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.552639Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.552670Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.553240Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.553995Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.555989Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.557569Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T21:45:06.559219Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T21:45:06.560446Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T21:45:06.589536Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.589606Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.590172Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.590594Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.593325Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:06.594250Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T21:45:06.622842Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.623443Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.625801Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T21:45:06.655263Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.655337Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.655891Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.656281Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.658770Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T21:45:06.659908Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T21:45:06.688493Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.688679Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.688710Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.689232Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:06.692204Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T21:45:06.722490Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.238164Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.238772Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.241781Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T21:45:07.270650Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.302748Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.303307Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.306061Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T21:45:07.335285Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.399505Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.400058Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.402664Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T21:45:07.432138Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.440030Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.440526Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.443254Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T21:45:07.472742Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.737433Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.738026Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.740797Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T21:45:07.769908Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.770236Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.770415Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.770682Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.771185Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.775072Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T21:45:07.776501Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T21:45:07.777453Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T21:45:07.805129Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.805196Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.805218Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.805414Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.806168Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.808402Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T21:45:07.809427Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T21:45:07.839332Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.839396Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.839580Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T21:45:07.841617Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T21:45:07.871875Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T21:45:11.393762Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T21:45:19.662917Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T21:45:19.662917Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] 
[2026-06-03T21:45:19.662917Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T21:45:19.663009Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] 
[2026-06-03T21:45:19.663016Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T21:45:19.663022Z] [nf-50d72d95d354f9f8d177cde2789f1692-b00e5-c7mmr] [592_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec