mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0a20jkmg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:47:53,841 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:47:54,637 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:47:54,806 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:47:55,706 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:47:55,859 - cnv_pipe.batch.run_model - INFO - Processing cluster 388 with 167 probes
2026-06-03 21:47:56,232 - cnv_pipe.batch.run_model.cluster388 - INFO - Child process started for cluster 388 with 167 probes
2026-06-03 21:48:46,068 - cnv_pipe.batch.run_model.cluster388 - INFO - Child process finished cluster 388. Wrote cluster_388_samples.csv and cluster_388_params.csv
2026-06-03 21:48:46,069 - cnv_pipe.batch.run_model - INFO - Cluster 388 finished in 50.21 seconds. Status: SUCCESS