mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gg4cipr6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:26,014 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:27,020 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:27,218 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:28,417 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:28,638 - cnv_pipe.batch.run_model - INFO - Processing cluster 560 with 200 probes
2026-06-03 21:48:29,125 - cnv_pipe.batch.run_model.cluster560 - INFO - Child process started for cluster 560 with 200 probes
2026-06-03 21:49:45,771 - cnv_pipe.batch.run_model.cluster560 - INFO - Child process finished cluster 560. Wrote cluster_560_samples.csv and cluster_560_params.csv
2026-06-03 21:49:45,773 - cnv_pipe.batch.run_model - INFO - Cluster 560 finished in 77.13 seconds. Status: SUCCESS