mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s8elfpg2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:03,847 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:04,659 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:04,852 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:05,980 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:06,050 - cnv_pipe.batch.run_model - INFO - Processing cluster 448 with 199 probes
2026-06-03 21:48:06,428 - cnv_pipe.batch.run_model.cluster448 - INFO - Child process started for cluster 448 with 199 probes
2026-06-03 21:49:05,220 - cnv_pipe.batch.run_model.cluster448 - INFO - Child process finished cluster 448. Wrote cluster_448_samples.csv and cluster_448_params.csv
2026-06-03 21:49:05,221 - cnv_pipe.batch.run_model - INFO - Cluster 448 finished in 59.17 seconds. Status: SUCCESS