File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/ef2b6d65deb1852f9efdb3c8340956/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-89qly_70 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:47:54,517 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:47:55,321 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:47:55,492 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:47:56,538 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:47:56,605 - cnv_pipe.batch.run_model - INFO - Processing cluster 393 with 155 probes
2026-06-03 21:47:56,985 - cnv_pipe.batch.run_model.cluster393 - INFO - Child process started for cluster 393 with 155 probes
2026-06-03 21:48:43,917 - cnv_pipe.batch.run_model.cluster393 - INFO - Child process finished cluster 393. Wrote cluster_393_samples.csv and cluster_393_params.csv
2026-06-03 21:48:43,918 - cnv_pipe.batch.run_model - INFO - Cluster 393 finished in 47.31 seconds. Status: SUCCESS