mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2m75vy27 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:16,431 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:17,217 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:17,385 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:18,388 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:18,453 - cnv_pipe.batch.run_model - INFO - Processing cluster 519 with 196 probes
2026-06-03 21:48:18,821 - cnv_pipe.batch.run_model.cluster519 - INFO - Child process started for cluster 519 with 196 probes
2026-06-03 21:49:13,291 - cnv_pipe.batch.run_model.cluster519 - INFO - Child process finished cluster 519. Wrote cluster_519_samples.csv and cluster_519_params.csv
2026-06-03 21:49:13,292 - cnv_pipe.batch.run_model - INFO - Cluster 519 finished in 54.84 seconds. Status: SUCCESS