mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i04bbewb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:44,038 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:44,847 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:45,020 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:45,969 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:46,137 - cnv_pipe.batch.run_model - INFO - Processing cluster 675 with 106 probes
2026-06-03 21:48:46,515 - cnv_pipe.batch.run_model.cluster675 - INFO - Child process started for cluster 675 with 106 probes
2026-06-03 21:49:21,535 - cnv_pipe.batch.run_model.cluster675 - INFO - Child process finished cluster 675. Wrote cluster_675_samples.csv and cluster_675_params.csv
2026-06-03 21:49:21,536 - cnv_pipe.batch.run_model - INFO - Cluster 675 finished in 35.40 seconds. Status: SUCCESS