mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4ulgdxnx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:16,899 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:17,687 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:17,856 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:18,755 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:18,914 - cnv_pipe.batch.run_model - INFO - Processing cluster 520 with 123 probes
2026-06-03 21:48:19,283 - cnv_pipe.batch.run_model.cluster520 - INFO - Child process started for cluster 520 with 123 probes
2026-06-03 21:48:57,267 - cnv_pipe.batch.run_model.cluster520 - INFO - Child process finished cluster 520. Wrote cluster_520_samples.csv and cluster_520_params.csv
2026-06-03 21:48:57,268 - cnv_pipe.batch.run_model - INFO - Cluster 520 finished in 38.35 seconds. Status: SUCCESS