mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3veeec_h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:46:45,783 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:46:46,566 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:46:46,734 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:46:47,607 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:46:47,767 - cnv_pipe.batch.run_model - INFO - Processing cluster 11 with 189 probes
2026-06-03 21:46:48,141 - cnv_pipe.batch.run_model.cluster11 - INFO - Child process started for cluster 11 with 189 probes
2026-06-03 21:47:41,102 - cnv_pipe.batch.run_model.cluster11 - INFO - Child process finished cluster 11. Wrote cluster_11_samples.csv and cluster_11_params.csv
2026-06-03 21:47:41,103 - cnv_pipe.batch.run_model - INFO - Cluster 11 finished in 53.34 seconds. Status: SUCCESS