File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/54a2e5c346b12ba9b6b9d50c71f1d3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-t53u6yhi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:50:14,309 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:50:15,115 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:50:15,285 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:50:16,303 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:50:16,369 - cnv_pipe.batch.run_model - INFO - Processing cluster 1161 with 185 probes
2026-06-03 21:50:16,745 - cnv_pipe.batch.run_model.cluster1161 - INFO - Child process started for cluster 1161 with 185 probes
2026-06-03 21:51:10,803 - cnv_pipe.batch.run_model.cluster1161 - INFO - Child process finished cluster 1161. Wrote cluster_1161_samples.csv and cluster_1161_params.csv
2026-06-03 21:51:10,804 - cnv_pipe.batch.run_model - INFO - Cluster 1161 finished in 54.43 seconds. Status: SUCCESS