File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/c618242b70a7976f51752be1edcfc1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rvpm4clp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:49:29,715 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:49:30,535 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:49:30,712 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:49:31,679 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:49:31,853 - cnv_pipe.batch.run_model - INFO - Processing cluster 908 with 152 probes
2026-06-03 21:49:32,230 - cnv_pipe.batch.run_model.cluster908 - INFO - Child process started for cluster 908 with 152 probes
2026-06-03 21:50:17,763 - cnv_pipe.batch.run_model.cluster908 - INFO - Child process finished cluster 908. Wrote cluster_908_samples.csv and cluster_908_params.csv
2026-06-03 21:50:17,764 - cnv_pipe.batch.run_model - INFO - Cluster 908 finished in 45.91 seconds. Status: SUCCESS