File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/336ceed526794216da53e4e67bf628/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7fqovu_w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:51:05,002 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:51:05,786 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:51:05,953 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:51:06,866 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:51:07,018 - cnv_pipe.batch.run_model - INFO - Processing cluster 1414 with 190 probes
2026-06-03 21:51:07,382 - cnv_pipe.batch.run_model.cluster1414 - INFO - Child process started for cluster 1414 with 190 probes
2026-06-03 21:52:02,136 - cnv_pipe.batch.run_model.cluster1414 - INFO - Child process finished cluster 1414. Wrote cluster_1414_samples.csv and cluster_1414_params.csv
2026-06-03 21:52:02,137 - cnv_pipe.batch.run_model - INFO - Cluster 1414 finished in 55.12 seconds. Status: SUCCESS