mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fx_npgpi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:48:38,097 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:48:38,901 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:48:39,105 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:48:39,999 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:48:40,158 - cnv_pipe.batch.run_model - INFO - Processing cluster 641 with 194 probes
2026-06-03 21:48:40,526 - cnv_pipe.batch.run_model.cluster641 - INFO - Child process started for cluster 641 with 194 probes
2026-06-03 21:49:38,650 - cnv_pipe.batch.run_model.cluster641 - INFO - Child process finished cluster 641. Wrote cluster_641_samples.csv and cluster_641_params.csv
2026-06-03 21:49:38,651 - cnv_pipe.batch.run_model - INFO - Cluster 641 finished in 58.49 seconds. Status: SUCCESS