File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/9938a2f226434eabfb21444202f827/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-za2pj7n8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:35,645 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:36,495 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:36,665 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:37,591 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:37,777 - cnv_pipe.batch.run_model - INFO - Processing cluster 498 with 124 probes
2026-06-04 16:58:38,146 - cnv_pipe.batch.run_model.cluster498 - INFO - Child process started for cluster 498 with 124 probes
2026-06-04 16:59:19,177 - cnv_pipe.batch.run_model.cluster498 - INFO - Child process finished cluster 498. Wrote cluster_498_samples.csv and cluster_498_params.csv
2026-06-04 16:59:19,178 - cnv_pipe.batch.run_model - INFO - Cluster 498 finished in 41.40 seconds. Status: SUCCESS