cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo AlignmentStat HCC1395_tumor.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo HCC1395_tumor.sentieon.insert_size_metrics --algo QualDistribution HCC1395_tumor.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle HCC1395_tumor.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle HCC1395_tumor.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:159000001, elapsed 0.1s, est remaining 1.0s, peak mem 81MB, user 0.1s, sys 1.2s, output queue size 2
progress 10% @chr2:80000001, elapsed 0.1s, est remaining 0.9s, peak mem 81MB, user 0.1s, sys 2.6s, output queue size 1
progress 15% @chr2:234000001, elapsed 0.1s, est remaining 0.8s, peak mem 81MB, user 0.2s, sys 3.9s, output queue size 2
progress 20% @chr3:150000001, elapsed 0.2s, est remaining 0.8s, peak mem 81MB, user 0.2s, sys 5.3s, output queue size 3
progress 25% @chr4:114000001, elapsed 0.2s, est remaining 0.7s, peak mem 81MB, user 0.3s, sys 6.6s, output queue size 3
progress 30% @chr5:85000001, elapsed 0.3s, est remaining 0.7s, peak mem 81MB, user 0.3s, sys 8.0s, output queue size 1
progress 35% @chr6:66000001, elapsed 0.3s, est remaining 0.6s, peak mem 81MB, user 0.4s, sys 9.4s, output queue size 1
progress 40% @chr7:55000001, elapsed 0.4s, est remaining 0.6s, peak mem 81MB, user 0.4s, sys 10.8s, output queue size 1
progress 45% @chr8:55000001, elapsed 0.4s, est remaining 0.5s, peak mem 81MB, user 0.5s, sys 12.1s, output queue size 2
progress 50% @chr9:71000001, elapsed 0.5s, est remaining 0.5s, peak mem 81MB, user 0.6s, sys 13.4s, output queue size 2
progress 55% @chr10:94000001, elapsed 0.5s, est remaining 0.4s, peak mem 81MB, user 0.6s, sys 14.9s, output queue size 1
progress 60% @chr11:128000001, elapsed 0.6s, est remaining 0.4s, peak mem 81MB, user 0.7s, sys 16.1s, output queue size 2
progress 65% @chr13:13000001, elapsed 0.6s, est remaining 0.3s, peak mem 81MB, user 0.8s, sys 17.5s, output queue size 3
progress 70% @chr14:61000001, elapsed 0.7s, est remaining 0.3s, peak mem 81MB, user 0.8s, sys 18.8s, output queue size 4
progress 75% @chr16:12000001, elapsed 0.7s, est remaining 0.2s, peak mem 81MB, user 0.9s, sys 20.2s, output queue size 1
progress 80% @chr17:80000001, elapsed 0.7s, est remaining 0.2s, peak mem 81MB, user 1.0s, sys 21.5s, output queue size 4
progress 85% @chr20:19000001, elapsed 0.8s, est remaining 0.1s, peak mem 81MB, user 1.0s, sys 22.9s, output queue size 3
progress 90% @chr21:6000001, elapsed 0.9s, est remaining 0.1s, peak mem 96MB, user 1.6s, sys 23.6s, output queue size 114
progress 95% @chr21:32000001, elapsed 0.9s, est remaining 0.0s, peak mem 111MB, user 2.3s, sys 24.5s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.6s, est remaining 0.0s, peak mem 132MB, user 5.1s, sys 25.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 50813904
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.214 user 12.835 sys 14.495 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.002 sys 1.625 real
idle: 79 calls 0.009 user 0.017 sys 49.278 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 138567680 mem 5.229 user 26.584 sys 2.680 real