mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fi7i9hy4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:08,011 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:08,897 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:09,073 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:10,204 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:10,283 - cnv_pipe.batch.run_model - INFO - Processing cluster 413 with 125 probes
2026-06-04 16:58:10,661 - cnv_pipe.batch.run_model.cluster413 - INFO - Child process started for cluster 413 with 125 probes
2026-06-04 16:58:50,430 - cnv_pipe.batch.run_model.cluster413 - INFO - Child process finished cluster 413. Wrote cluster_413_samples.csv and cluster_413_params.csv
2026-06-04 16:58:50,431 - cnv_pipe.batch.run_model - INFO - Cluster 413 finished in 40.15 seconds. Status: SUCCESS