File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/2870669be14269a3300f86ad20b349/.command.log
Size
89.4 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr12_102480219-102480663.bed)
Attempt

Content

View in new tab 
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/2870669be14269a3300f86ad20b349/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/493cf948b1d450f8051fba2ea0097a/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/493cf948b1d450f8051fba2ea0097a/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/2870669be14269a3300f86ad20b349/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-04T16:54:09.764067Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:09.766855Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:09.766872Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:09.766877Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:09.766882Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXuqQwxy'
[2026-06-04T16:54:09.766889Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:09.766895Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:09.766899Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:09.766903Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-04T16:54:09.766907Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:09.766911Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:09.766915Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:09.766919Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:09.766923Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:09.767549Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:09.767675Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:09.773621Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:09.774592Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:09.774926Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:09.775346Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:09.775562Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.776328Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.776430Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.776595Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.777224Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.777624Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.777940Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.778256Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.778403Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.780629Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.782121Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.782671Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.782777Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.783024Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.783303Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:09.783369Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.783507Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.783576Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.783690Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.783807Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.784322Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.784648Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.785087Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.785499Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.785919Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.785998Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786150Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786238Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786376Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786458Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786582Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786665Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786784Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.786854Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.787590Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.787833Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.787975Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788070Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788218Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788306Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788440Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788515Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788639Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788712Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.788867Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.789268Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.789718Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.789796Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.789983Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790058Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790181Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790251Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790374Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790442Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790563Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790633Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.790808Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.791076Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.791635Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.791721Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.791858Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.791934Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.792063Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.792155Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.792362Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.792445Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.792564Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.792782Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.793450Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.793533Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.793734Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.793806Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.793923Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.793996Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.795927Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.796612Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.796782Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.796874Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.797023Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.797105Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.797241Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.797318Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.797451Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.797521Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.797673Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.798012Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.798889Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.799008Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.799150Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.799291Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.799421Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.799489Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.799608Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.799802Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.800765Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.800836Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.800965Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.801033Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.815874Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.815992Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.816063Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.816524Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.817412Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.817517Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.817584Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.817733Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.817805Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.817855Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:09.834699Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.835565Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.835968Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.836639Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.839277Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T16:54:09.839938Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.842008Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.843300Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T16:54:09.843508Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.844689Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.845996Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.851057Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T16:54:09.856944Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T16:54:09.860111Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T16:54:09.864462Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T16:54:09.875204Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T16:54:10.002537Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T16:54:10.016059Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.016181Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.016214Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.017415Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.017834Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.018559Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.019428Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.025454Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T16:54:10.028884Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.031482Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T16:54:10.039780Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T16:54:10.043647Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T16:54:10.202598Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.204477Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.210425Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T16:54:10.270733Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.272221Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.276198Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T16:54:10.305002Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.306504Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.310232Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T16:54:10.323212Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.324654Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.328662Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T16:54:10.439937Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.441394Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.446042Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T16:54:10.506908Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.508570Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.513418Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T16:54:10.975336Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.976344Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.980548Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T16:54:11.041493Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.042627Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.046762Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T16:54:11.559135Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.560253Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.564149Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T16:54:12.227955Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.228083Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.229175Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.229541Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.234104Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T16:54:12.262057Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.263214Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267594Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T16:54:12.378743Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.379887Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.383733Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T16:54:12.444765Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.445939Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.450087Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T16:54:12.561208Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.562263Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.566138Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T16:54:12.682748Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.684677Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.689269Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T16:54:12.750111Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.751662Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.756433Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T16:54:12.867440Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.868963Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.873315Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T16:54:12.934205Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.935809Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.940365Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T16:54:13.001192Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.002671Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.007141Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T16:54:13.067942Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.069340Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.073250Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T16:54:13.134490Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.135803Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.139909Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T16:54:13.200897Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.200997Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.201917Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.202307Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.206422Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T16:54:13.207180Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.207707Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T16:54:13.208578Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.211736Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T16:54:13.240865Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.241933Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.245562Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T16:54:13.306849Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.307769Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.311648Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T16:54:13.373045Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.374101Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.377849Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T16:54:13.790585Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.792106Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.796101Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T16:54:13.857023Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.858367Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.862627Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T16:54:13.923620Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.924787Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.928507Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T16:54:14.039834Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.040923Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.045009Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T16:54:14.045602Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.046479Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.050324Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T16:54:14.104533Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T16:54:14.111193Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.111281Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.111307Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.112281Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.112691Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.113155Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.116777Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T16:54:14.119756Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T16:54:14.120895Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T16:54:14.178343Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.179477Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.183208Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T16:54:14.244715Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.246165Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.250113Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T16:54:14.561894Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.562852Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.567219Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T16:54:14.628182Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.629138Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.632955Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T16:54:14.794824Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.795620Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.799456Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T16:54:14.860844Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.861825Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.865513Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T16:54:14.926893Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.928171Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.932182Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T16:54:14.992993Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.994603Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.999122Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T16:54:15.059915Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.061042Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.065243Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T16:54:15.126081Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.127338Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.130982Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T16:54:15.192045Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.193225Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.197498Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T16:54:15.210327Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.211420Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.215794Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T16:54:15.426932Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.427978Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.431656Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T16:54:15.432551Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.433454Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.436547Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T16:54:15.449622Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.450585Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.453837Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T16:54:15.482766Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.483883Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.487608Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T16:54:15.492358Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.492429Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.493366Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.493810Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.497990Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T16:54:15.499088Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T16:54:15.526617Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.527552Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.531372Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T16:54:15.592519Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.593572Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.597955Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T16:54:15.859442Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.860541Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.864453Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T16:54:15.925591Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.926677Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.930845Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T16:54:15.943402Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.944590Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.948127Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T16:54:15.976939Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.977866Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.982310Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:15.994838Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.995899Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.999848Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T16:54:16.060808Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.061826Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.066357Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:16.078517Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.079663Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.083569Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T16:54:16.144743Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.144916Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.145948Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.146489Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.150721Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T16:54:16.187351Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:16.211598Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.211723Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.212925Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.213515Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.217852Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T16:54:16.219621Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T16:54:16.280834Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.281857Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.285925Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T16:54:16.346819Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.347882Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.353288Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T16:54:16.613815Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.614885Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.619254Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T16:54:16.680021Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.680938Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.685401Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T16:54:16.795968Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.796998Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.800763Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T16:54:16.829695Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.830561Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.834635Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T16:54:16.839068Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.839869Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.843669Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T16:54:16.872418Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.873395Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.877665Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T16:54:16.906297Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.907191Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.910361Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.911339Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.913635Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T16:54:16.914824Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T16:54:16.976896Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.978352Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.979140Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.980133Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.984992Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T16:54:16.985761Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T16:54:17.044756Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.044865Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.760998Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.761834Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.765496Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T16:54:17.826650Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.041391Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.042316Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.046182Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T16:54:18.107373Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.107504Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.108069Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.111354Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T16:54:18.172795Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.205222Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.205722Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.208968Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T16:54:18.221724Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.222192Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.226046Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T16:54:18.254701Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.262674Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.079800Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.080420Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.084115Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T16:54:19.144999Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.145346Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.145535Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.145958Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.146266Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.151980Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:19.155880Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:19.179793Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:19.180645Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.180954Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.184672Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:19.185314Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.185373Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.185581Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.189036Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:19.217671Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.218984Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.219182Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.222660Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:19.283871Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.351392Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:28.655429Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:28.655429Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] 
[2026-06-04T16:54:28.655429Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:28.655501Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] 
[2026-06-04T16:54:28.655509Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:28.655516Z] [nf-302870669be14269a3300f86ad20b349-4fcd9-vsdtx] [701_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec