cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:182000001, elapsed 0.1s, est remaining 1.1s, peak mem 102MB, user 0.1s, sys 1.3s, output queue size 26
progress 10% @chr2:65000001, elapsed 0.1s, est remaining 1.1s, peak mem 102MB, user 0.2s, sys 3.0s, output queue size 69
progress 15% @chr2:225000001, elapsed 0.2s, est remaining 1.0s, peak mem 102MB, user 0.2s, sys 4.8s, output queue size 35
progress 20% @chr3:140000001, elapsed 0.2s, est remaining 1.0s, peak mem 102MB, user 0.2s, sys 6.6s, output queue size 18
progress 25% @chr4:105000001, elapsed 0.3s, est remaining 0.9s, peak mem 102MB, user 0.4s, sys 8.3s, output queue size 16
progress 30% @chr5:109000001, elapsed 0.4s, est remaining 0.8s, peak mem 102MB, user 0.4s, sys 10.1s, output queue size 22
progress 35% @chr6:60000001, elapsed 0.4s, est remaining 0.8s, peak mem 102MB, user 0.5s, sys 11.7s, output queue size 37
progress 40% @chr7:43000001, elapsed 0.5s, est remaining 0.7s, peak mem 102MB, user 0.6s, sys 13.5s, output queue size 12
progress 45% @chr8:47000001, elapsed 0.5s, est remaining 0.6s, peak mem 102MB, user 0.7s, sys 15.3s, output queue size 25
progress 50% @chr9:91000001, elapsed 0.6s, est remaining 0.6s, peak mem 102MB, user 0.7s, sys 17.0s, output queue size 36
progress 55% @chr10:110000001, elapsed 0.6s, est remaining 0.5s, peak mem 102MB, user 0.8s, sys 18.7s, output queue size 9
progress 60% @chr11:132000001, elapsed 0.7s, est remaining 0.5s, peak mem 102MB, user 0.9s, sys 20.4s, output queue size 27
progress 65% @chr13:33000001, elapsed 0.8s, est remaining 0.4s, peak mem 102MB, user 0.9s, sys 22.2s, output queue size 25
progress 70% @chr14:45000001, elapsed 0.8s, est remaining 0.4s, peak mem 102MB, user 1.0s, sys 24.1s, output queue size 18
progress 75% @chr16:26000001, elapsed 0.9s, est remaining 0.3s, peak mem 102MB, user 1.1s, sys 25.9s, output queue size 15
progress 80% @chr17:74000001, elapsed 0.9s, est remaining 0.2s, peak mem 102MB, user 1.2s, sys 27.7s, output queue size 21
progress 85% @chr20:16000001, elapsed 1.0s, est remaining 0.2s, peak mem 102MB, user 1.3s, sys 29.6s, output queue size 22
progress 90% @chrX:28000001, elapsed 1.1s, est remaining 0.1s, peak mem 108MB, user 1.8s, sys 31.0s, output queue size 114
progress 95% @chrY:26000001, elapsed 1.2s, est remaining 0.1s, peak mem 117MB, user 2.2s, sys 32.6s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.7s, est remaining 0.0s, peak mem 150MB, user 3.4s, sys 35.2s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395354
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.374 user 18.411 sys 19.754 real
done: 1 calls 0.000 user 0.000 sys 0.002 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.002 sys 1.701 real
idle: 84 calls 0.007 user 0.029 sys 43.848 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 157392896 mem 3.567 user 35.819 sys 2.865 real