File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/9439ff8c2a70378101d5ce168edd90/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1jhsn5za because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:30,104 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:30,960 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:31,131 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:32,135 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:32,294 - cnv_pipe.batch.run_model - INFO - Processing cluster 638 with 153 probes
2026-06-04 16:59:32,677 - cnv_pipe.batch.run_model.cluster638 - INFO - Child process started for cluster 638 with 153 probes
2026-06-04 17:00:21,405 - cnv_pipe.batch.run_model.cluster638 - INFO - Child process finished cluster 638. Wrote cluster_638_samples.csv and cluster_638_params.csv
2026-06-04 17:00:21,406 - cnv_pipe.batch.run_model - INFO - Cluster 638 finished in 49.11 seconds. Status: SUCCESS