.command.log - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr4_22420786-22421189.bed)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/37c0936fa3ee992c1c99a5d66a0867/.command.log
Size: 87.4 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr4_22420786-22421189.bed)
Attempt
Content

  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/37c0936fa3ee992c1c99a5d66a0867/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/448667b5ccbe0b39d1a99e9a645079/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/448667b5ccbe0b39d1a99e9a645079/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/37c0936fa3ee992c1c99a5d66a0867/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-04T16:54:09.919819Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:09.922658Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:09.922673Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:09.922678Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:09.922683Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXbFgE7f'
[2026-06-04T16:54:09.922688Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:09.922693Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:09.922697Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:09.922700Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-04T16:54:09.922704Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:09.922708Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:09.922712Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:09.922725Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:09.922736Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:09.923332Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:09.923470Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:09.929869Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:09.930926Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:09.931288Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:09.931631Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:09.931853Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.932376Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.932483Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.932560Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.932706Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.933112Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.933546Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.933757Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.933997Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.934980Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.935411Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.938030Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.938602Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.939001Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:09.939202Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.939414Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.939839Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940091Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940236Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940306Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940510Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940580Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940695Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940766Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940879Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.940941Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.941065Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.941176Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.941587Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.941878Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.941999Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942104Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942218Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942283Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942399Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942461Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942570Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942635Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942747Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942813Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.942967Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.943170Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.943617Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.943686Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.943796Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.943859Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.943975Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.944041Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.944339Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.944943Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.946143Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.946696Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.946935Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.947561Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.947687Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.947754Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.947883Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.947957Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.948079Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.948163Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.948293Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.948358Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.948484Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.948669Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.949394Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.949471Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.949591Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.949655Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.949774Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.949841Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.949951Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.950014Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.950120Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.950186Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.952207Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953069Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953316Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953398Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953522Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953596Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953709Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953780Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.953954Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.954019Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.954132Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.954352Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.954829Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.955657Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.955811Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.955880Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.955994Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.956061Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.956196Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.956266Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.956383Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.956445Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.972448Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.972607Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.972682Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.972899Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.972971Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.973155Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.973227Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.973369Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.973444Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:09.973506Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:09.979375Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.980600Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.981050Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.981619Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.982272Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.982883Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.983605Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.985077Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.986018Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.993731Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T16:54:09.998127Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-04T16:54:10.005000Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:10.019837Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-04T16:54:10.023748Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-04T16:54:10.024101Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:10.034210Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-04T16:54:10.035825Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:11.210240Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.211443Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.216931Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-04T16:54:11.427031Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.428315Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.432926Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:11.643814Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.645587Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.650064Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T16:54:12.463780Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.463896Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.465812Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.466288Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.470571Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-04T16:54:12.471752Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T16:54:12.531574Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.532769Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.537399Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-04T16:54:12.570142Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.571334Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.575454Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:12.837403Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.837535Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.838638Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.839015Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.844584Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-04T16:54:12.903966Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.905358Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.909204Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:12.970069Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.971240Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.975028Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-04T16:54:13.036106Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.037229Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.041588Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-04T16:54:13.102519Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.103661Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.108347Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-04T16:54:13.670514Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.670656Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.671722Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.672165Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.676675Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-04T16:54:13.678541Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T16:54:13.737773Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.737863Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.738886Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.739242Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.744872Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T16:54:13.745289Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-04T16:54:13.748638Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.749586Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.753418Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T16:54:13.839597Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T16:54:13.864547Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.864655Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.865696Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.866290Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.871189Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-04T16:54:13.872887Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-04T16:54:13.934397Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.935559Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.939720Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T16:54:14.000752Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.001810Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.006846Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T16:54:14.619214Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.620394Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.624223Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T16:54:14.685573Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.686589Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.690286Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-04T16:54:14.751554Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.752676Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.756604Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T16:54:14.818038Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.818173Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.819158Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.819780Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.823523Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-04T16:54:14.825105Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:14.885304Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.885398Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.886314Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.886650Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.891596Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-04T16:54:14.926753Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T16:54:14.952883Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.952986Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.953020Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.953880Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.954210Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.954679Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.958629Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:14.961812Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:14.963199Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:15.021074Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.022121Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.025961Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-04T16:54:15.187581Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.188637Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.192423Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:15.253622Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.254793Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.259328Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-04T16:54:15.272022Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.273017Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.276770Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-04T16:54:15.337613Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.338655Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.342455Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T16:54:15.805321Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.805420Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.806194Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.806705Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.811672Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-04T16:54:15.812891Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T16:54:15.873542Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.873649Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.874683Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.875263Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.879073Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T16:54:15.882517Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T16:54:15.943336Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.943447Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.944492Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.945095Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.949552Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T16:54:15.950372Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-04T16:54:16.009990Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.010937Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.015441Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:16.226851Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.227789Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.231506Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-04T16:54:16.292844Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.292931Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.293690Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.294112Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.298476Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T16:54:16.299520Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:16.359400Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.360421Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.363979Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:16.376927Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.377963Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.381397Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T16:54:16.394576Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.395382Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.398717Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-04T16:54:16.460080Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.461025Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.465037Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-04T16:54:16.676567Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.677426Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.680723Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-04T16:54:16.742346Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.743242Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.747217Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:16.808361Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.808470Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.809218Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.809591Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.813181Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:16.814304Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T16:54:16.817797Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.818481Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.821625Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:16.850432Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.850517Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.851222Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.851746Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.855079Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.856846Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T16:54:16.857708Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.860975Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:17.474475Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.475327Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.478930Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-04T16:54:17.540309Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.541111Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.545183Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:17.606025Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.606839Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.610477Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:17.671637Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.672430Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.675998Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:17.887802Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.888606Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.892550Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T16:54:17.953717Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.954665Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.958574Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T16:54:18.220478Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.221245Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.225733Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T16:54:18.304935Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:18.337107Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.337232Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.337859Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.338581Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.343756Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-04T16:54:18.345795Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:18.503300Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.503416Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.504096Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.504651Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.508599Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:18.510016Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:18.569816Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.569912Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.570547Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.571367Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.574686Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T16:54:18.575813Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-04T16:54:18.635696Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.635797Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.635822Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.635842Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.636463Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.636921Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.637525Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.642031Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:18.642736Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.643628Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T16:54:18.647611Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:18.648849Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-04T16:54:18.676391Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.676477Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.677088Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.677603Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.681740Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:18.682971Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T16:54:18.686175Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.686227Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.686710Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.687249Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.691334Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:18.692051Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:18.719450Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.751910Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.752556Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.756291Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T16:54:18.817241Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.082341Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.082918Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.086747Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T16:54:19.148306Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.180690Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.181499Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.185817Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T16:54:19.246190Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.360641Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.361203Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.365087Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:19.426107Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.426206Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.426750Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.430530Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-04T16:54:19.491353Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.006456Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.007030Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.010292Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:20.039281Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.103505Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.103989Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.107036Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:20.136281Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.136569Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.136698Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.137344Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.137798Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.142164Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:20.143339Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:20.144395Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:20.170695Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.170759Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.170959Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.171281Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.173512Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.175486Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:20.175743Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:20.206830Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.206901Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.207069Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.217152Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:20.271035Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.535554Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:28.811405Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:28.811405Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] 
[2026-06-04T16:54:28.811405Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:28.811488Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] 
[2026-06-04T16:54:28.811495Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:28.811502Z] [nf-4037c0936fa3ee992c1c99a5d66a0867-d8328-c87vg] [672_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec