File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/70cf56ef099a1f244141d2933ecae1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mlezrpr6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:04,317 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:05,133 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:05,295 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:06,304 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:06,371 - cnv_pipe.batch.run_model - INFO - Processing cluster 394 with 189 probes
2026-06-04 16:58:06,767 - cnv_pipe.batch.run_model.cluster394 - INFO - Child process started for cluster 394 with 189 probes
2026-06-04 16:59:06,840 - cnv_pipe.batch.run_model.cluster394 - INFO - Child process finished cluster 394. Wrote cluster_394_samples.csv and cluster_394_params.csv
2026-06-04 16:59:06,841 - cnv_pipe.batch.run_model - INFO - Cluster 394 finished in 60.47 seconds. Status: SUCCESS