[2026-06-04T16:54:20.243248Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:20.244356Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:20.244375Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:20.244380Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:20.244385Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXPnMpxn'
[2026-06-04T16:54:20.244389Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:20.244393Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:20.244397Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:20.244401Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-04T16:54:20.244404Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:20.244408Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:20.244411Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:20.244415Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:20.244419Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:20.244820Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:20.244897Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:20.250779Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:20.251494Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:20.251736Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:20.252097Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:20.252312Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.253498Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.254353Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.256265Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.256395Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.256679Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:20.257131Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.257398Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.257655Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.257740Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.258397Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.258644Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.258793Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.258869Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259001Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259074Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259200Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259274Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259400Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259472Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259692Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.259995Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260292Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260368Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260496Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260565Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260704Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260772Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260896Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.260978Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.261151Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.261302Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.261888Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.261991Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.262123Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.262201Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.262336Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.262409Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.262535Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.262604Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.262854Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.263210Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.263357Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.263465Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.263650Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.263744Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.263905Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.264003Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.264484Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.264893Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265027Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265103Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265229Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265299Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265417Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265512Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265633Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265704Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265818Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.265898Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.266072Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.266620Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.266742Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.266807Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.266924Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.266994Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.267113Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.267177Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.267317Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.267386Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.267501Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.267567Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.267821Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.268336Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.270013Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.270612Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.270770Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.270849Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.270977Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.271074Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.271199Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.271268Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.271414Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.271496Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.271700Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.272437Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.272559Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.272635Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.272755Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.272823Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.272940Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.273013Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.273153Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.273225Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.273344Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.273415Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.273590Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.273699Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.282936Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.290848Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.291587Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.291771Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.291925Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.292167Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.292409Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.292464Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.292601Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.292685Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.292917Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.293123Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:20.293222Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.293309Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:20.293801Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.294136Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.295115Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.297635Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.298217Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T16:54:20.300824Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.301216Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T16:54:20.308787Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T16:54:20.313603Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T16:54:20.316209Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T16:54:20.316613Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T16:54:20.318770Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T16:54:20.320414Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T16:54:20.382779Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.385039Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.395200Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T16:54:20.419159Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.419233Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.420727Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.421117Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.425695Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T16:54:20.427463Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T16:54:21.488345Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.489878Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.493727Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T16:54:21.654950Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.655048Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.656572Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.657145Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.661127Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T16:54:21.662516Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T16:54:21.721847Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.723614Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.726776Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T16:54:22.038538Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.040150Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.043578Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T16:54:22.104615Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.106432Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.109696Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T16:54:22.571910Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.573004Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.576318Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T16:54:22.639492Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.639586Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.640722Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.640994Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.645224Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T16:54:22.646611Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T16:54:22.705967Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.706042Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.706070Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.707577Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.707839Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.708539Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.714859Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T16:54:22.716926Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T16:54:22.718220Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T16:54:22.773597Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.775142Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.778375Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T16:54:22.807559Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.809147Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.812597Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T16:54:22.873276Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.873371Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.874823Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.875235Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.878631Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T16:54:22.880003Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T16:54:22.939577Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.939714Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.940758Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.941085Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.944732Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T16:54:22.945477Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T16:54:23.005948Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.006059Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.007105Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.009322Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.010185Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T16:54:23.013073Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T16:54:23.041769Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.042793Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.046250Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T16:54:23.408180Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.409660Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.412760Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T16:54:23.474000Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.475602Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.479162Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T16:54:23.492169Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.493542Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.497316Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T16:54:23.557816Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.559305Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.562514Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T16:54:23.623649Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.624988Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.628643Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T16:54:23.889851Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.891444Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.895066Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T16:54:24.006263Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.008044Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.011493Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T16:54:24.072476Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.073885Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.076885Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T16:54:24.138195Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.139599Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.142936Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T16:54:24.204047Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.205085Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.209121Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T16:54:24.269962Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.270946Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.274309Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T16:54:24.279007Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.279881Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.283270Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T16:54:24.344323Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.345343Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.348950Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T16:54:24.409974Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.410958Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.414620Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T16:54:24.475557Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.476531Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.479846Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T16:54:24.540993Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.542029Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.545502Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T16:54:24.606460Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.607481Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.610897Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T16:54:25.073112Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.073198Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.074104Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.074824Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.078557Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T16:54:25.079881Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T16:54:25.140113Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.141630Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.144894Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T16:54:25.174652Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.175634Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.179160Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T16:54:25.240081Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.240186Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.241110Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.241374Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.246413Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T16:54:25.247680Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T16:54:25.407907Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.408777Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.412500Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T16:54:25.473551Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.474466Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.478328Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T16:54:25.478758Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.479525Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.483058Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T16:54:25.511789Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.512673Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.516390Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T16:54:25.545327Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.546173Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.549316Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T16:54:25.578489Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.578563Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.579318Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.581241Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.582405Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T16:54:25.585534Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T16:54:25.614461Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.615270Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.618633Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T16:54:25.647875Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.648739Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.652222Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T16:54:25.713309Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.714158Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.717005Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T16:54:25.778547Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.779386Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.782373Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T16:54:25.843623Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.844380Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.848157Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T16:54:26.310042Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.310830Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.313976Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T16:54:26.576485Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.576576Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.577314Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.579484Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.580163Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T16:54:26.583054Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T16:54:26.612336Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.613243Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.616014Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T16:54:26.630460Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.631257Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.634996Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T16:54:26.664221Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.664979Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.668394Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:26.779823Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.780574Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.783899Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:26.844985Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.845760Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.849284Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T16:54:26.910156Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.910907Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.913937Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T16:54:26.975275Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.976041Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.979834Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T16:54:27.040567Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.040660Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.041358Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.041876Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.045250Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:27.046141Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T16:54:27.051365Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.052075Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.055183Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T16:54:27.084270Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.084372Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.085462Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.085696Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.086160Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.089533Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.091361Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T16:54:27.092960Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T16:54:27.093947Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T16:54:27.123304Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.124022Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.126834Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T16:54:27.127644Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.128195Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.131507Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T16:54:27.160335Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.161178Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.161609Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.162587Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.165671Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T16:54:27.195575Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T16:54:27.227005Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.227095Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.227727Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.228051Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.231606Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T16:54:27.232711Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T16:54:27.292413Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.292498Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.293085Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.293355Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.296474Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T16:54:27.297135Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T16:54:27.358062Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.358149Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.622733Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.623331Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.626424Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T16:54:27.687949Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.688036Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.688583Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.691838Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T16:54:27.752908Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.518634Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.519194Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.522362Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T16:54:28.583577Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.747902Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.748431Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.751304Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T16:54:28.780731Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.995222Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.995718Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:28.998283Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T16:54:29.028629Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.292935Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.293377Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.295968Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T16:54:29.325362Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.325642Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.325771Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.326289Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.327149Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.330386Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:29.331998Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:29.333112Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:29.360709Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.360770Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.360793Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.361004Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.361224Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.363867Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:29.364725Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:29.393071Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.393132Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.393334Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:29.395599Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:29.425328Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:30.891947Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:39.132953Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:39.132953Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] 
[2026-06-04T16:54:39.132953Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:39.133009Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] 
[2026-06-04T16:54:39.133016Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:39.133024Z] [nf-5c8cc3eda70d4bbb870c9ef518893427-2e592-2msqh] [607_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec