mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vr2cylt0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:57,235 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:58,131 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:58,308 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:59,418 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:59,489 - cnv_pipe.batch.run_model - INFO - Processing cluster 623 with 55 probes
2026-06-04 16:58:59,964 - cnv_pipe.batch.run_model.cluster623 - INFO - Child process started for cluster 623 with 55 probes
2026-06-04 16:59:22,260 - cnv_pipe.batch.run_model.cluster623 - INFO - Child process finished cluster 623. Wrote cluster_623_samples.csv and cluster_623_params.csv
2026-06-04 16:59:22,261 - cnv_pipe.batch.run_model - INFO - Cluster 623 finished in 22.77 seconds. Status: SUCCESS