Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/2154b96e1a48c032c52691e704859b/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/448667b5ccbe0b39d1a99e9a645079/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/448667b5ccbe0b39d1a99e9a645079/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/2154b96e1a48c032c52691e704859b/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-04T16:54:07.372251Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:07.372709Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:07.372725Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:07.372733Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:07.372742Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXCwlwOD'
[2026-06-04T16:54:07.372749Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:07.372757Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:07.372764Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:07.372770Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] memMb: 507674
[2026-06-04T16:54:07.372778Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:07.372785Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:07.372792Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:07.372799Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:07.372807Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:07.373143Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:07.373229Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:07.379849Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:07.380503Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:07.380646Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:07.380831Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:07.381057Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.381500Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.381612Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.381697Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.381842Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.381920Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.382057Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.382144Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.382365Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.382704Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.382873Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.383018Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.383401Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.383737Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.383849Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.384078Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.385427Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.385779Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:07.386072Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.386321Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.386546Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.386635Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.386774Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.386853Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.386982Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.387054Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.387188Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.387261Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.387533Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.387835Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.388068Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.388391Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.388529Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.388617Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.388752Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.388826Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.388959Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.389032Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.389160Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.389230Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.389359Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.389454Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.389918Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.390192Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.390323Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.390395Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.390527Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.390601Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.390792Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.390908Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.391056Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.391130Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.391423Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.391852Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.391993Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392085Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392242Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392327Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392453Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392527Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392657Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392729Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.392924Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.393477Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.393611Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.393687Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.393810Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.393885Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.394537Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.394694Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.395328Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.395408Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.395536Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.395615Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.397188Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.397864Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398026Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398108Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398244Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398322Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398461Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398538Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398675Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.398753Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.399005Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.399661Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.399847Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.399978Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.400174Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.400263Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.400424Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.400501Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.400639Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.400908Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.401808Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.402010Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.402857Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.402933Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.419534Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.420331Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.420579Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.420771Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.421852Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.421961Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.422110Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.422408Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.422713Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.423114Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.423226Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.423835Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.424014Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.424515Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.424746Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:07.425163Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:07.425398Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.426058Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.427043Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.431443Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T16:54:07.434361Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T16:54:07.436285Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:07.440243Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T16:54:07.441192Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T16:54:07.444533Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:07.445547Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T16:54:07.505297Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T16:54:07.507558Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.509235Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.511957Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:07.512878Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.514902Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.515194Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.516916Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.519354Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:07.520230Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T16:54:07.548824Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.550281Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:07.553186Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T16:54:08.365608Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.367399Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.369819Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T16:54:08.399276Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.400951Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.403317Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T16:54:08.514972Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.516652Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.519118Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T16:54:08.630631Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.630698Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.631786Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.632040Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.635210Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:08.691020Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:08.696320Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.696388Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.697413Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.697603Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.700029Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:08.701007Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:08.729413Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.730426Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.733018Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:08.762112Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.763114Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.765502Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:08.794809Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.794870Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.795848Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.796059Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.798433Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:08.799352Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T16:54:08.827860Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.828819Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.831118Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T16:54:08.860518Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.861548Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.864097Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T16:54:08.893245Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.894250Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:08.896614Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T16:54:09.258667Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.259718Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.262463Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T16:54:09.291569Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.292566Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.295684Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T16:54:09.707680Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.708738Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.711606Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T16:54:09.772487Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.773378Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.775559Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:09.805127Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.806079Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.808328Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:09.837773Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.837847Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.838732Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.838930Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.841345Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T16:54:09.842218Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T16:54:09.870675Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.871678Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.874250Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T16:54:09.935409Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.936260Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.938622Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T16:54:09.967920Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.968966Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:09.971242Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T16:54:10.000830Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.001722Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.003893Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T16:54:10.033433Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.034345Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.036600Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:10.098098Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.098997Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.101349Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:10.130776Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.131690Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.134044Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T16:54:10.345793Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.346770Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.349192Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T16:54:10.378495Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.379405Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.381942Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T16:54:10.593483Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.594392Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.596607Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T16:54:10.626087Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.626173Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.627017Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.627242Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.629646Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T16:54:10.630477Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T16:54:10.659164Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.660059Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.662497Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T16:54:10.691802Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.692671Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:10.695073Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T16:54:11.006880Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.007773Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.010445Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T16:54:11.071703Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.073037Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.075414Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T16:54:11.104943Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.106206Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.108912Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:11.170127Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.171077Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.173320Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:11.202757Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.203544Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.205809Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T16:54:11.367607Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.368844Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.371304Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T16:54:11.482938Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.484278Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.486474Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:11.516118Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.517193Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.519635Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:11.581086Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.582452Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.584878Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:11.646392Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.647594Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.649891Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:11.679425Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.680567Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.682770Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:11.894749Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.895553Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.897812Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:11.927214Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.927874Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.930387Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T16:54:11.959492Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.960122Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.962198Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T16:54:11.991713Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.992342Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:11.994518Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:12.023980Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.024718Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.026792Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T16:54:12.056365Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.056405Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.056989Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.057154Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.059608Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:12.060343Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T16:54:12.088966Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.089546Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.091885Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T16:54:12.097018Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.097571Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.099657Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T16:54:12.129174Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.129850Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.132123Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T16:54:12.494007Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.494678Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.496871Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T16:54:12.526411Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.527087Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.529364Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T16:54:12.542830Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.543477Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.545339Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T16:54:12.575151Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.575770Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.577979Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T16:54:13.140177Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.140236Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.140843Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.141042Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.143458Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T16:54:13.144382Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:13.172942Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.173555Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.175453Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T16:54:13.205114Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.205158Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.205183Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.205712Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.205886Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.206049Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.209082Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:13.210039Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T16:54:13.210853Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:13.238357Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.239493Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.241596Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T16:54:13.271212Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.271884Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.273822Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T16:54:13.303667Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.303768Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.304537Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.304830Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.306868Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:13.307647Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T16:54:13.336947Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.337004Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.337543Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.337730Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.340027Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T16:54:13.340918Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T16:54:13.353438Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.353937Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.355790Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T16:54:13.369464Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.370007Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.371949Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T16:54:13.385536Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.386040Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.387976Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T16:54:13.417625Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.417663Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.418169Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.418353Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.420715Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T16:54:13.421232Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T16:54:13.450482Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.450542Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.451079Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.453295Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:13.514749Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.515276Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.517365Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:13.546882Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.610893Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.611388Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.613446Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:13.643004Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.007410Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.007929Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.010212Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T16:54:14.039532Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.039572Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.040027Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.042156Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T16:54:14.071794Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.137027Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.137501Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.139479Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T16:54:15.169063Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.583286Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.583717Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.585762Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T16:54:15.615292Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.181678Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.182159Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.184123Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T16:54:22.213732Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.214023Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.214153Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.214319Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.214531Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.218470Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:22.218691Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:22.219222Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:22.246947Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.246995Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.247021Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.247216Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.247374Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.249635Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:22.273065Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:22.279272Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.279355Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.279664Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.281504Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:22.311514Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:26.380823Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:40.491129Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:40.491129Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] 
[2026-06-04T16:54:40.491129Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:40.491183Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] 
[2026-06-04T16:54:40.491190Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:40.491197Z] [nf-ba2154b96e1a48c032c52691e704859b-75830-tptdm] [733_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec