mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-a20w2j38 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:42,246 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:43,108 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:43,286 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:44,490 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:44,567 - cnv_pipe.batch.run_model - INFO - Processing cluster 445 with 199 probes
2026-06-04 16:58:45,060 - cnv_pipe.batch.run_model.cluster445 - INFO - Child process started for cluster 445 with 199 probes
2026-06-04 16:59:46,746 - cnv_pipe.batch.run_model.cluster445 - INFO - Child process finished cluster 445. Wrote cluster_445_samples.csv and cluster_445_params.csv
2026-06-04 16:59:46,747 - cnv_pipe.batch.run_model - INFO - Cluster 445 finished in 62.18 seconds. Status: SUCCESS