mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gvik8qj7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:11,939 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:12,786 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:12,958 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:13,994 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:14,205 - cnv_pipe.batch.run_model - INFO - Processing cluster 677 with 196 probes
2026-06-04 16:59:14,574 - cnv_pipe.batch.run_model.cluster677 - INFO - Child process started for cluster 677 with 196 probes
2026-06-04 17:00:13,983 - cnv_pipe.batch.run_model.cluster677 - INFO - Child process finished cluster 677. Wrote cluster_677_samples.csv and cluster_677_params.csv
2026-06-04 17:00:13,985 - cnv_pipe.batch.run_model - INFO - Cluster 677 finished in 59.78 seconds. Status: SUCCESS