File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/421d73ad9493ad394a361a6082da23/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k9oi2zka because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:00:49,665 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:00:50,616 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:00:50,809 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:00:51,856 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:00:52,014 - cnv_pipe.batch.run_model - INFO - Processing cluster 1274 with 187 probes
2026-06-04 17:00:52,463 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process started for cluster 1274 with 187 probes
2026-06-04 17:01:55,653 - cnv_pipe.batch.run_model.cluster1274 - INFO - Child process finished cluster 1274. Wrote cluster_1274_samples.csv and cluster_1274_params.csv
2026-06-04 17:01:55,654 - cnv_pipe.batch.run_model - INFO - Cluster 1274 finished in 63.64 seconds. Status: SUCCESS