mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ghyz1f41 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:57:01,721 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:57:02,588 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:57:02,767 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:57:03,795 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:57:03,869 - cnv_pipe.batch.run_model - INFO - Processing cluster 56 with 189 probes
2026-06-04 16:57:04,355 - cnv_pipe.batch.run_model.cluster56 - INFO - Child process started for cluster 56 with 189 probes
2026-06-04 16:58:04,815 - cnv_pipe.batch.run_model.cluster56 - INFO - Child process finished cluster 56. Wrote cluster_56_samples.csv and cluster_56_params.csv
2026-06-04 16:58:04,816 - cnv_pipe.batch.run_model - INFO - Cluster 56 finished in 60.95 seconds. Status: SUCCESS