mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xq6k3w_s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:42,389 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:43,249 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:43,429 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:44,610 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:44,680 - cnv_pipe.batch.run_model - INFO - Processing cluster 317 with 194 probes
2026-06-04 16:58:45,056 - cnv_pipe.batch.run_model.cluster317 - INFO - Child process started for cluster 317 with 194 probes
2026-06-04 16:59:44,788 - cnv_pipe.batch.run_model.cluster317 - INFO - Child process finished cluster 317. Wrote cluster_317_samples.csv and cluster_317_params.csv
2026-06-04 16:59:44,790 - cnv_pipe.batch.run_model - INFO - Cluster 317 finished in 60.11 seconds. Status: SUCCESS