Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/bc48f89cf83311c1a1e552d4cc1712/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/bc48f89cf83311c1a1e552d4cc1712/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/381faa0df790cd8579fab559ff3f2b/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/381faa0df790cd8579fab559ff3f2b/Sig_18_Blood.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXfE9Wbu/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXfE9Wbu/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXfE9Wbu/chr6_138229684-138229952.bed.gz.tbi
[2026-06-04T16:54:14.686866Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:14.687721Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:14.687730Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:14.687735Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:14.687739Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXfE9Wbu'
[2026-06-04T16:54:14.687743Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:14.687747Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:14.687751Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:14.687755Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-04T16:54:14.687758Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:14.687762Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:14.687766Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:14.687769Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:14.687773Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:14.688636Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:14.688759Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:14.694751Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:14.695916Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:14.696227Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:14.696617Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:14.697016Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.697731Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.697839Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.697917Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.698059Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.698678Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.699052Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.699233Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.699366Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.699807Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.700168Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.700991Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.701223Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.703988Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.704760Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:14.704967Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.705551Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.705921Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706099Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706180Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706409Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706480Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706594Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706663Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706775Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.706850Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.707150Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.707462Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.707580Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.707646Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.707757Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.707832Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.707962Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.708025Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.708139Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.708204Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.708318Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.708383Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.708577Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.708745Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.709497Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.709822Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.709941Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710006Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710114Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710180Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710292Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710424Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710543Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710610Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710730Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710796Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710917Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.710999Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.711657Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.712211Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.712402Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.712487Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.712609Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.712682Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.712808Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.712872Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.713006Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.713074Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.713212Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.713290Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.713692Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.714231Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.714361Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.714428Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.714541Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.714608Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.714717Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.714780Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.717018Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.717720Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.717855Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.717926Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718039Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718104Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718216Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718278Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718403Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718470Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718577Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718649Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.718942Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.719672Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.719787Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.719858Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.719973Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720039Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720145Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720211Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720322Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720384Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720524Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720587Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.720742Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.721062Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722121Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722204Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722320Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722385Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722500Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722570Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722680Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722744Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722867Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.722933Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.725915Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.726656Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.726943Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.727014Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.741960Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.742950Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.743111Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.744072Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.744530Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.744908Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.744995Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.745250Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.745513Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.745739Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.746223Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.747080Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.747621Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.748134Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.748862Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.749136Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:14.750501Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.751814Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.753707Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.760076Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T16:54:14.765285Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T16:54:14.769938Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T16:54:14.773859Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T16:54:14.779007Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T16:54:14.782003Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T16:54:14.782853Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T16:54:14.896981Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.898172Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.903720Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T16:54:15.014829Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.016216Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.020111Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T16:54:15.743261Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T16:54:15.783333Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.783447Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.784737Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.785155Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.789686Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T16:54:16.100780Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.102243Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.106849Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T16:54:16.569035Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.570306Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.574165Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T16:54:16.685614Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.685727Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.685767Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.686947Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.687347Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.688101Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.693089Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T16:54:16.694747Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T16:54:16.696085Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T16:54:16.804191Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.804286Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.804315Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.805535Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.806596Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.807051Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.811948Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T16:54:16.812532Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T16:54:16.846553Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T16:54:16.873729Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.873831Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.873860Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.875030Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.875381Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.875672Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.880735Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T16:54:16.882325Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T16:54:16.883966Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T16:54:16.941795Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.943397Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.943764Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.946935Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.947832Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T16:54:16.950879Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T16:54:17.012262Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.012399Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.013482Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.013814Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.017813Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T16:54:17.019815Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T16:54:17.079139Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.080415Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.084830Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T16:54:17.444648Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T16:54:17.446150Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.446248Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.447374Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.447919Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.453163Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T16:54:17.454333Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T16:54:17.512947Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.514118Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.518522Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T16:54:17.729298Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.730500Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.734393Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T16:54:17.845786Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.846905Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.850549Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T16:54:17.911921Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.913121Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.917004Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T16:54:18.078588Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.079678Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.084611Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T16:54:18.195906Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.197128Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.200848Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T16:54:18.262390Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.263624Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.267776Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T16:54:18.328444Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.329678Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.334167Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.334533Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T16:54:18.335346Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.339371Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T16:54:18.400101Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.401307Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.405247Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T16:54:18.466589Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.467712Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.472030Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T16:54:18.884086Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.885192Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.889933Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T16:54:18.950743Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.952002Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.955996Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T16:54:19.017040Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.018207Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.022431Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T16:54:19.083063Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.084228Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.089554Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T16:54:19.199507Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.199620Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.200608Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.201004Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.205153Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T16:54:19.206799Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T16:54:19.234396Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.235459Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.238939Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T16:54:19.239725Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.240474Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.244831Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T16:54:19.305413Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.305540Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.306540Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.306960Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.311043Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T16:54:19.314272Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T16:54:19.373059Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.373184Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.374192Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.374557Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.377562Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.379716Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T16:54:19.381094Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.381533Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T16:54:19.384893Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T16:54:19.446471Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.446582Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.446620Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.447589Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.447986Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.451266Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.451913Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T16:54:19.455373Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T16:54:19.457073Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T16:54:19.516514Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.516613Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.517591Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.518003Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.521955Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T16:54:19.523179Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T16:54:19.534601Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.535517Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.539297Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T16:54:19.543853Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.544725Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.548396Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T16:54:19.577252Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.577352Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.578288Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.578748Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.582378Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.584212Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T16:54:19.585162Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T16:54:19.585605Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.588867Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T16:54:19.589431Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.590092Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.593101Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T16:54:19.622211Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.622306Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.622339Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.623196Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.623603Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.623866Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.629839Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T16:54:19.634196Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.634956Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T16:54:19.635485Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T16:54:19.636297Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.639927Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T16:54:19.751220Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.752281Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.755875Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T16:54:19.817281Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.818243Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.822302Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T16:54:19.883205Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.884191Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.887865Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T16:54:19.948918Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.949926Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.954158Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T16:54:20.366085Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.367053Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.370833Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T16:54:20.431909Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.433058Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.437192Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T16:54:20.497783Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.498713Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.502229Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T16:54:20.563512Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.564376Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.568135Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T16:54:20.729682Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.730580Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.734956Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T16:54:21.347390Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.347494Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.348307Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.348856Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.354182Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T16:54:21.355370Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T16:54:21.415365Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.415483Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.416277Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.416689Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.420439Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T16:54:21.421868Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T16:54:21.481659Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.481754Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.482525Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.483097Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.487329Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T16:54:21.488668Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T16:54:21.648514Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.649381Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.652845Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T16:54:21.665701Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.666522Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.670333Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T16:54:21.781707Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.781832Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.782595Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.782944Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.786970Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T16:54:21.788681Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T16:54:21.847858Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.848713Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.852622Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T16:54:22.063795Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.064659Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.068399Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T16:54:22.280168Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.280995Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.285131Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T16:54:22.346261Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.347118Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.350859Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T16:54:22.412033Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.412891Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.416813Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T16:54:22.878958Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.879063Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.879786Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.880373Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.884180Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T16:54:22.917940Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T16:54:22.945144Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.945245Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.945275Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.945943Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.946416Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.946784Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.950222Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T16:54:22.953869Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T16:54:22.981567Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T16:54:23.014289Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.014485Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.014638Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.014733Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.015335Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.015671Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.015976Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.016660Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.020916Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T16:54:23.023186Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T16:54:23.024581Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T16:54:23.027102Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T16:54:23.040091Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.040664Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.044408Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T16:54:23.056596Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.056680Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.057247Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.057605Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.059933Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.061878Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T16:54:23.062551Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T16:54:23.062854Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.066731Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T16:54:23.078868Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.079411Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.082424Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T16:54:23.082965Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.083411Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.087752Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T16:54:23.099228Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.099311Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.099810Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.103232Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T16:54:23.115845Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.123501Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.139281Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.353680Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.354252Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.357493Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T16:54:23.386369Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.386898Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.389760Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T16:54:23.402728Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.434665Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.649054Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.649608Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.652947Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T16:54:23.713883Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.978594Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.979141Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.982843Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T16:54:24.043701Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.044013Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.044146Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.044629Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.044933Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.050727Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:24.052148Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:24.053328Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:24.110787Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.110863Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.110887Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.111091Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.111694Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.114652Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:24.143243Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:24.176042Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.176130Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.176335Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.179070Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:24.208243Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:25.324732Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:33.576644Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:33.576644Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] 
[2026-06-04T16:54:33.576644Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:33.576746Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] 
[2026-06-04T16:54:33.576757Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:33.576763Z] [nf-54bc48f89cf83311c1a1e552d4cc1712-6d815-f8h7k] [667_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec