mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xl986vws because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:57:12,258 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:57:13,117 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:57:13,292 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:57:14,284 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:57:14,442 - cnv_pipe.batch.run_model - INFO - Processing cluster 113 with 189 probes
2026-06-04 16:57:14,823 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process started for cluster 113 with 189 probes
2026-06-04 16:58:14,571 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process finished cluster 113. Wrote cluster_113_samples.csv and cluster_113_params.csv
2026-06-04 16:58:14,572 - cnv_pipe.batch.run_model - INFO - Cluster 113 finished in 60.13 seconds. Status: SUCCESS