File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/c641d4a8913d16a1b8c92e56c262d8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2dvol_m3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:07,262 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:08,106 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:08,268 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:09,236 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:09,397 - cnv_pipe.batch.run_model - INFO - Processing cluster 710 with 173 probes
2026-06-04 16:59:09,785 - cnv_pipe.batch.run_model.cluster710 - INFO - Child process started for cluster 710 with 173 probes
2026-06-04 17:00:01,840 - cnv_pipe.batch.run_model.cluster710 - INFO - Child process finished cluster 710. Wrote cluster_710_samples.csv and cluster_710_params.csv
2026-06-04 17:00:01,841 - cnv_pipe.batch.run_model - INFO - Cluster 710 finished in 52.44 seconds. Status: SUCCESS