cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo AlignmentStat HCC1395_BL.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo HCC1395_BL.sentieon.insert_size_metrics --algo QualDistribution HCC1395_BL.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle HCC1395_BL.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle HCC1395_BL.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:167000001, elapsed 0.0s, est remaining 0.6s, peak mem 79MB, user 0.1s, sys 0.6s, output queue size 8
progress 10% @chr2:76000001, elapsed 0.1s, est remaining 0.6s, peak mem 79MB, user 0.2s, sys 1.4s, output queue size 6
progress 15% @chr2:237000001, elapsed 0.1s, est remaining 0.5s, peak mem 79MB, user 0.2s, sys 2.3s, output queue size 33
progress 20% @chr3:156000001, elapsed 0.1s, est remaining 0.5s, peak mem 79MB, user 0.3s, sys 3.1s, output queue size 8
progress 25% @chr4:117000001, elapsed 0.2s, est remaining 0.5s, peak mem 79MB, user 0.4s, sys 3.9s, output queue size 6
progress 30% @chr5:87000001, elapsed 0.2s, est remaining 0.4s, peak mem 79MB, user 0.5s, sys 4.6s, output queue size 9
progress 35% @chr6:67000001, elapsed 0.2s, est remaining 0.4s, peak mem 79MB, user 0.6s, sys 5.4s, output queue size 9
progress 40% @chr7:53000001, elapsed 0.2s, est remaining 0.4s, peak mem 79MB, user 0.7s, sys 6.3s, output queue size 19
progress 45% @chr8:59000001, elapsed 0.3s, est remaining 0.3s, peak mem 79MB, user 0.8s, sys 7.2s, output queue size 2
progress 50% @chr9:78000001, elapsed 0.3s, est remaining 0.3s, peak mem 79MB, user 0.8s, sys 8.1s, output queue size 14
progress 55% @chr10:95000001, elapsed 0.3s, est remaining 0.3s, peak mem 79MB, user 0.9s, sys 8.9s, output queue size 6
progress 60% @chr11:122000001, elapsed 0.4s, est remaining 0.2s, peak mem 79MB, user 1.1s, sys 9.7s, output queue size 6
progress 65% @chr13:8000001, elapsed 0.4s, est remaining 0.2s, peak mem 79MB, user 1.2s, sys 10.5s, output queue size 7
progress 70% @chr14:63000001, elapsed 0.4s, est remaining 0.2s, peak mem 79MB, user 1.3s, sys 11.2s, output queue size 22
progress 75% @chr15:98000001, elapsed 0.5s, est remaining 0.2s, peak mem 79MB, user 1.5s, sys 12.0s, output queue size 17
progress 80% @chr18:3000001, elapsed 0.5s, est remaining 0.1s, peak mem 79MB, user 1.6s, sys 12.8s, output queue size 13
progress 85% @chr20:21000001, elapsed 0.5s, est remaining 0.1s, peak mem 79MB, user 1.7s, sys 13.7s, output queue size 1
progress 90% @chrX:43000001, elapsed 0.6s, est remaining 0.1s, peak mem 106MB, user 2.2s, sys 14.0s, output queue size 114
progress 95% @chrY:34000001, elapsed 0.6s, est remaining 0.0s, peak mem 126MB, user 2.8s, sys 14.5s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.3s, est remaining 0.0s, peak mem 157MB, user 5.6s, sys 15.2s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 51395354
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.238 user 7.524 sys 9.132 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.001 sys 1.341 real
idle: 76 calls 0.026 user 0.018 sys 50.243 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 165416960 mem 5.778 user 15.812 sys 2.382 real