mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tlosugur because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:57:49,468 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:57:50,373 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:57:50,547 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:57:51,549 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:57:51,719 - cnv_pipe.batch.run_model - INFO - Processing cluster 297 with 123 probes
2026-06-04 16:57:52,136 - cnv_pipe.batch.run_model.cluster297 - INFO - Child process started for cluster 297 with 123 probes
2026-06-04 16:58:31,865 - cnv_pipe.batch.run_model.cluster297 - INFO - Child process finished cluster 297. Wrote cluster_297_samples.csv and cluster_297_params.csv
2026-06-04 16:58:31,866 - cnv_pipe.batch.run_model - INFO - Cluster 297 finished in 40.15 seconds. Status: SUCCESS