mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k5cnvpnd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:57,173 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:58,158 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:58,350 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:59,430 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:59,650 - cnv_pipe.batch.run_model - INFO - Processing cluster 459 with 158 probes
2026-06-04 16:59:00,064 - cnv_pipe.batch.run_model.cluster459 - INFO - Child process started for cluster 459 with 158 probes
2026-06-04 16:59:52,593 - cnv_pipe.batch.run_model.cluster459 - INFO - Child process finished cluster 459. Wrote cluster_459_samples.csv and cluster_459_params.csv
2026-06-04 16:59:52,595 - cnv_pipe.batch.run_model - INFO - Cluster 459 finished in 52.95 seconds. Status: SUCCESS