[2026-06-04T16:54:14.360002Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:14.360809Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:14.360825Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:14.360829Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:14.360835Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX6krm4w'
[2026-06-04T16:54:14.360839Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:14.360845Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:14.360849Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:14.360853Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-04T16:54:14.360856Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:14.360860Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:14.360864Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:14.360867Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:14.360872Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:14.361809Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:14.361959Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:14.368583Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:14.369536Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:14.369765Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:14.370106Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:14.370477Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.371347Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.371732Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.372122Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.372219Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.372559Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.373062Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.373623Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.373790Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.374105Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.375636Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.376670Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.376939Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:14.377124Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.377275Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.377347Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.377461Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.377565Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.377677Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.377741Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.377929Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378205Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378492Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378561Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378674Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378739Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378864Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378930Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.379039Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.379105Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.379218Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.379328Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.379622Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.379965Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.380248Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.380613Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.380733Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.380800Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.380911Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.380972Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.381085Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.381152Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.381285Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.381352Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.381570Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.381649Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.381997Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382431Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382549Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382617Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382724Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382790Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382899Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382961Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.383069Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.383133Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.383243Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.383310Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.383752Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384129Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384249Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384314Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384425Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384493Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384607Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384677Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384786Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384849Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.384958Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.385024Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.385185Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.385340Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.386021Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.386090Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.388262Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.388948Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389080Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389149Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389287Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389357Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389467Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389531Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389651Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389719Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389828Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.389897Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.390178Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.391079Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392123Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392198Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392321Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392392Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392503Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392608Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392721Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392785Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392904Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.392965Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.410530Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.410946Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.411239Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.411498Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.412575Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.412790Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.412960Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.413587Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.413809Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.414181Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.414552Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.414927Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.416267Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.416436Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.417113Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.418174Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.418599Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.419572Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:14.420267Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.428293Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T16:54:14.429881Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T16:54:14.430958Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T16:54:14.436230Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T16:54:14.444738Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:14.446563Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T16:54:14.561333Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.562547Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.568112Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T16:54:14.678827Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.680003Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.683763Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T16:54:14.688034Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T16:54:14.688590Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.689623Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.693269Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T16:54:14.854995Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.856170Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.859900Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T16:54:14.889627Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.890750Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.895036Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T16:54:14.895458Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.896296Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.900377Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T16:54:14.929306Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.930461Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.934066Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T16:54:15.847872Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.849410Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.853267Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T16:54:16.566709Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.567809Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.571497Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T16:54:16.572371Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.573187Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.577068Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T16:54:16.637966Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.639327Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.639851Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.643053Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.644013Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:16.647073Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T16:54:16.708163Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.709237Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.713219Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T16:54:16.824172Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.825272Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.829451Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T16:54:16.890221Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.891483Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.895521Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T16:54:17.006834Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.007979Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.012707Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T16:54:17.123006Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.124053Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.128114Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T16:54:17.188904Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.190001Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.193950Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T16:54:17.326560Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T16:54:17.355370Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.355501Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.356488Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.356912Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.360701Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T16:54:17.362139Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T16:54:17.421846Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.423041Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.427041Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T16:54:17.487986Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.489116Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.493238Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T16:54:17.554251Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.555314Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.560035Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T16:54:17.588243Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.589375Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.592837Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T16:54:17.605694Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.606709Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.610461Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T16:54:17.639364Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.640467Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.644223Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T16:54:17.644569Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.645294Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.648476Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T16:54:17.709890Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.710918Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.715382Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T16:54:17.775753Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.776983Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.780892Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T16:54:17.892215Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.892338Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.893589Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.894026Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.897902Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T16:54:17.899760Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T16:54:17.959064Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.960619Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.965271Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T16:54:18.075753Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.077147Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.081074Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T16:54:18.141818Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.142765Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.146933Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T16:54:18.458711Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.459711Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.463536Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T16:54:18.525225Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.526229Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.530188Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T16:54:18.691858Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.692836Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.696446Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T16:54:18.758058Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.758200Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.759098Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.759395Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.763749Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T16:54:18.764653Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T16:54:18.824828Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.824958Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.825853Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.826300Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.830168Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T16:54:18.832158Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T16:54:18.891237Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.892298Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.895891Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T16:54:18.924684Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.925668Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.929868Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T16:54:18.930218Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.930991Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.934789Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T16:54:18.964689Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.965612Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.970030Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.970547Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T16:54:18.971162Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.974091Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.974933Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T16:54:18.975479Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.979184Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T16:54:19.008069Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.009409Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.009754Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.011551Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.011885Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.016335Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T16:54:19.017770Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.018130Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T16:54:19.021273Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T16:54:19.082507Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.082654Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.083440Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.083917Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.088619Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T16:54:19.090347Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T16:54:19.117372Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.118235Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.122096Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T16:54:19.183052Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.183930Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.187805Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T16:54:19.249080Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.249927Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.254436Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T16:54:19.365208Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.365934Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.369583Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T16:54:19.832318Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.833214Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.837854Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T16:54:20.048718Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.049608Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.054587Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T16:54:20.115534Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.116385Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.121323Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T16:54:20.181795Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.182622Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.186469Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T16:54:20.215339Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.216129Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.219998Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T16:54:20.280998Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.282028Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.285872Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T16:54:20.347117Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.347922Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.351788Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T16:54:20.412729Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.412860Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.413595Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.414202Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.418250Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T16:54:20.419500Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T16:54:20.479536Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.479644Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.480354Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.480696Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.484375Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T16:54:20.485800Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T16:54:20.545572Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.545682Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.546367Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.547368Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.550786Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T16:54:20.552780Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T16:54:20.612121Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.612902Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.616752Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T16:54:20.677763Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.678549Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.682269Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T16:54:20.743361Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.744136Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.748677Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T16:54:20.859519Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.860302Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.864010Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T16:54:20.925715Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.926359Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.930504Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T16:54:20.990911Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.991772Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.995583Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T16:54:21.157347Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.158096Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.161955Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T16:54:21.222786Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.223493Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.227268Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T16:54:21.288306Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.289010Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.293055Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T16:54:21.354064Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.354786Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.358299Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T16:54:21.419483Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.420196Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.424061Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T16:54:21.452914Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.453521Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.457314Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T16:54:21.457704Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.458287Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.461502Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T16:54:21.490653Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.705557Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.706177Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.709987Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T16:54:21.770970Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.771095Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.771795Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.775754Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T16:54:21.836949Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.837055Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.837662Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.841237Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T16:54:21.902535Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.218089Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.218696Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.222471Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T16:54:22.283494Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.799545Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.800148Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.804018Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T16:54:22.865080Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.979818Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.980380Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.983425Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T16:54:23.044645Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.108819Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.109395Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.112871Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T16:54:23.173974Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.174291Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.174462Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.174910Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.177497Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.178440Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:23.181731Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:23.183024Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:23.209681Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.209754Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.209964Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.213840Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:23.214155Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.214437Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.217463Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:23.246487Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.247771Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.247934Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:23.250758Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:23.280272Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:24.998635Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:33.250006Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:33.250006Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] 
[2026-06-04T16:54:33.250006Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:33.250112Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] 
[2026-06-04T16:54:33.250122Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:33.250129Z] [nf-00289d78a372bf1b2a8287b518d0a582-a8c4f-nqw58] [668_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec