File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/c1fc7c9c5e503f12232a51a4a87d30/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xbg3mpqc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:00:12,147 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:00:13,047 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:00:13,229 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:00:14,253 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:00:14,439 - cnv_pipe.batch.run_model - INFO - Processing cluster 751 with 200 probes
2026-06-04 17:00:14,834 - cnv_pipe.batch.run_model.cluster751 - INFO - Child process started for cluster 751 with 200 probes
2026-06-04 17:01:14,579 - cnv_pipe.batch.run_model.cluster751 - INFO - Child process finished cluster 751. Wrote cluster_751_samples.csv and cluster_751_params.csv
2026-06-04 17:01:14,581 - cnv_pipe.batch.run_model - INFO - Cluster 751 finished in 60.14 seconds. Status: SUCCESS