File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/8aa49633b035e5f63bb2317e3fea8f/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/0e2cd79214a491041a54e72c2c320c/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c1/5acbb43cc84f88373bdac37e56a5cf/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/8aa49633b035e5f63bb2317e3fea8f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/8e7419a176e7e1736ac01ad090fda9/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/dfe99a8c8654ac61a6d3fd2cb18f13/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/1aabe8f9ca7148e20be4efba66717f/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/3ec9a30c8f78270391725fe7388847/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/baa3fb33cf5b433aaf67a191f7136e/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/8aa49633b035e5f63bb2317e3fea8f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f6/81b649808293a7c0a2c11c82f4aafc/Sig_18_Blood.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory