File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/bf9f0cbec0cb0173a9bc4e362691ff/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2qs_rkss because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:21,182 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:22,131 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:22,323 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:23,524 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:23,598 - cnv_pipe.batch.run_model - INFO - Processing cluster 829 with 198 probes
2026-06-04 16:59:24,055 - cnv_pipe.batch.run_model.cluster829 - INFO - Child process started for cluster 829 with 198 probes
2026-06-04 17:00:32,014 - cnv_pipe.batch.run_model.cluster829 - INFO - Child process finished cluster 829. Wrote cluster_829_samples.csv and cluster_829_params.csv
2026-06-04 17:00:32,015 - cnv_pipe.batch.run_model - INFO - Cluster 829 finished in 68.42 seconds. Status: SUCCESS