File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/6b22af4c2199d4f17dac3be76d2cce/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l7zs4mdj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:45,785 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:46,638 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:46,801 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:47,717 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:47,881 - cnv_pipe.batch.run_model - INFO - Processing cluster 949 with 200 probes
2026-06-04 16:59:48,251 - cnv_pipe.batch.run_model.cluster949 - INFO - Child process started for cluster 949 with 200 probes
2026-06-04 17:00:47,240 - cnv_pipe.batch.run_model.cluster949 - INFO - Child process finished cluster 949. Wrote cluster_949_samples.csv and cluster_949_params.csv
2026-06-04 17:00:47,241 - cnv_pipe.batch.run_model - INFO - Cluster 949 finished in 59.36 seconds. Status: SUCCESS