File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/9f2e4cd6bd61f52b0f8614eb23caad/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l35dmzu_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:55,103 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:56,023 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:56,206 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:57,180 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:57,342 - cnv_pipe.batch.run_model - INFO - Processing cluster 1015 with 175 probes
2026-06-04 16:59:57,714 - cnv_pipe.batch.run_model.cluster1015 - INFO - Child process started for cluster 1015 with 175 probes
2026-06-04 17:00:51,728 - cnv_pipe.batch.run_model.cluster1015 - INFO - Child process finished cluster 1015. Wrote cluster_1015_samples.csv and cluster_1015_params.csv
2026-06-04 17:00:51,730 - cnv_pipe.batch.run_model - INFO - Cluster 1015 finished in 54.39 seconds. Status: SUCCESS