mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oq90c2uk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:07,763 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:08,544 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:08,706 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:09,584 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:09,743 - cnv_pipe.batch.run_model - INFO - Processing cluster 416 with 187 probes
2026-06-04 16:58:10,115 - cnv_pipe.batch.run_model.cluster416 - INFO - Child process started for cluster 416 with 187 probes
2026-06-04 16:59:03,643 - cnv_pipe.batch.run_model.cluster416 - INFO - Child process finished cluster 416. Wrote cluster_416_samples.csv and cluster_416_params.csv
2026-06-04 16:59:03,645 - cnv_pipe.batch.run_model - INFO - Cluster 416 finished in 53.90 seconds. Status: SUCCESS