File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/45281cbc350462bcdfb2d0d9aca283/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u1ad3x77 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:00:45,339 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:00:46,625 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:00:46,924 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:00:48,853 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:00:48,964 - cnv_pipe.batch.run_model - INFO - Processing cluster 1243 with 190 probes
2026-06-04 17:00:49,661 - cnv_pipe.batch.run_model.cluster1243 - INFO - Child process started for cluster 1243 with 190 probes
2026-06-04 17:02:21,531 - cnv_pipe.batch.run_model.cluster1243 - INFO - Child process finished cluster 1243. Wrote cluster_1243_samples.csv and cluster_1243_params.csv
2026-06-04 17:02:21,532 - cnv_pipe.batch.run_model - INFO - Cluster 1243 finished in 92.57 seconds. Status: SUCCESS