mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_krugx97 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:57:04,346 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:57:05,194 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:57:05,369 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:57:06,369 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:57:06,538 - cnv_pipe.batch.run_model - INFO - Processing cluster 67 with 195 probes
2026-06-04 16:57:06,932 - cnv_pipe.batch.run_model.cluster67 - INFO - Child process started for cluster 67 with 195 probes
2026-06-04 16:58:07,949 - cnv_pipe.batch.run_model.cluster67 - INFO - Child process finished cluster 67. Wrote cluster_67_samples.csv and cluster_67_params.csv
2026-06-04 16:58:07,951 - cnv_pipe.batch.run_model - INFO - Cluster 67 finished in 61.41 seconds. Status: SUCCESS